WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y106G6E.6 Sequence Name  Y106G6E.6
Length (nt)  1224   Chromosome Location  I: 10228220-10228375
Chromosome . Primary Identifier  I Chromosome Location . Start  10228220
Chromosome Location . End  10228375
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6E.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29604 CSNK-1 46.4 407 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00000115
WBRNAi00026563
WBRNAi00064696
WBRNAi00055261
WBRNAi00026564
WBRNAi00064613
WBRNAi00081320
WBRNAi00116665
WBRNAi00068700
WBRNAi00068698
WBRNAi00068699
WBRNAi00060196
WBRNAi00060197
WBRNAi00108257
WBRNAi00064521
WBRNAi00064814
WBRNAi00069069
WBRNAi00069068
WBRNAi00069070
WBRNAi00060194
WBRNAi00060195

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y106G6E.6 10228220 10228375 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013709 csnk-1 Y106G6E.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y106G6E.6 10228220 10228375 -1
CDS:Y106G6E.6 10228739 10228797 -1
CDS:Y106G6E.6 10228848 10228902 -1
CDS:Y106G6E.6 10228958 10229364 -1
CDS:Y106G6E.6 10229633 10229786 -1
CDS:Y106G6E.6 10230277 10230425 -1
CDS:Y106G6E.6 10230484 10230640 -1
CDS:Y106G6E.6 10231058 10231144 -1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y106G6E.6.2 Y106G6E.6.2 2653   I: 10226986-10233386
Transcript:Y106G6E.6.1 Y106G6E.6.1 2351   I: 10227163-10231214