WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20F10.1.1 Sequence Name  T20F10.1.1
Length (nt)  3077   Chromosome Location  I: 10291870-10297927
Chromosome . Primary Identifier  I Chromosome Location . Start  10291870
Chromosome Location . End  10297927 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20F10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007047 wts-1 T20F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20F10.1 T20F10.1 2727   I: 10292139-10292342

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20F10.1.1 10291870 10297927 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27453   473   I: 10291870-10292342 Caenorhabditis elegans
Exon27454   192   I: 10292630-10292821 Caenorhabditis elegans
Exon27455   361   I: 10292871-10293231 Caenorhabditis elegans
Exon27456   341   I: 10293386-10293726 Caenorhabditis elegans
Exon27457   567   I: 10294010-10294576 Caenorhabditis elegans
Exon27458   108   I: 10294821-10294928 Caenorhabditis elegans
Exon27459   106   I: 10294975-10295080 Caenorhabditis elegans
Exon27460   209   I: 10295139-10295347 Caenorhabditis elegans
Exon27461   258   I: 10295863-10296120 Caenorhabditis elegans
Exon27462   258   I: 10296502-10296759 Caenorhabditis elegans
Exon27463   204   I: 10297724-10297927 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20F10.1.1 10291870 10297927 -1

1 Sequence

Length
3077

1 Sequence Ontology Term

Identifier Name Description
transcript