WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC434.6a Sequence Name  ZC434.6a
Length (nt)  2166   Chromosome Location  I: 10341029-10341173
Chromosome . Primary Identifier  I Chromosome Location . Start  10341029
Chromosome Location . End  10341173
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC434.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE15229 APH-2, isoform a 81.4 721 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00067991
WBRNAi00058914
WBRNAi00086827
WBRNAi00086833
WBRNAi00086832
WBRNAi00004890
WBRNAi00038059
WBRNAi00086829
WBRNAi00086830
WBRNAi00063522
WBRNAi00086826
WBRNAi00111704
WBRNAi00061587
WBRNAi00116802

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC434.6a 10341029 10341173 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000148 aph-2 ZC434.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC434.6a 10341029 10341173 1
CDS:ZC434.6a 10341628 10342213 1
CDS:ZC434.6a 10342562 10342900 1
CDS:ZC434.6a 10343268 10343516 1
CDS:ZC434.6a 10343788 10344040 1
CDS:ZC434.6a 10344251 10344511 1
CDS:ZC434.6a 10344570 10344831 1
CDS:ZC434.6a 10345404 10345474 1

1 Sequence

Length
2166

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC434.6a.1 ZC434.6a.1 2375   I: 10340997-10345651