WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45H11.1b Sequence Name  F45H11.1b
Length (nt)  888   Chromosome Location  I: 10366621-10366776
Chromosome . Primary Identifier  I Chromosome Location . Start  10366621
Chromosome Location . End  10366776
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H11.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38353 SPTF-1, isoform b 31.4 295 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000314
WBRNAi00047450
WBRNAi00097527
WBRNAi00032329
WBRNAi00092971

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45H11.1b 10366621 10366776 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009743 sptf-1 F45H11.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45H11.1b 10366621 10366776 1
CDS:F45H11.1b 10366838 10367007 1
CDS:F45H11.1b 10367649 10367853 1
CDS:F45H11.1b 10368918 10369128 1
CDS:F45H11.1b 10371163 10371308 1

1 Sequence

Length
888

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45H11.1b.2 F45H11.1b.2 1275   I: 10366621-10371695
Transcript:F45H11.1b.1 F45H11.1b.1 1123   I: 10366621-10371697