WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H11.4a.1 Sequence Name  F45H11.4a.1
Length (nt)  3180   Chromosome Location  I: 10384219-10391388
Chromosome . Primary Identifier  I Chromosome Location . Start  10384219
Chromosome Location . End  10391388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003233 mgl-2 F45H11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H11.4a F45H11.4a 3108   I: 10384219-10384275

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H11.4a.1 10384219 10391388 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27745   57   I: 10384219-10384275 Caenorhabditis elegans
Exon27747   213   I: 10385306-10385518 Caenorhabditis elegans
Exon27750   101   I: 10385571-10385671 Caenorhabditis elegans
Exon27753   104   I: 10385860-10385963 Caenorhabditis elegans
Exon27756   303   I: 10386193-10386495 Caenorhabditis elegans
Exon27759   257   I: 10386643-10386899 Caenorhabditis elegans
Exon27762   513   I: 10387243-10387755 Caenorhabditis elegans
Exon27765   187   I: 10388008-10388194 Caenorhabditis elegans
Exon27768   135   I: 10388476-10388610 Caenorhabditis elegans
Exon27771   171   I: 10388660-10388830 Caenorhabditis elegans
Exon27774   448   I: 10389103-10389550 Caenorhabditis elegans
Exon27779   172   I: 10390255-10390426 Caenorhabditis elegans
Exon27782   178   I: 10390477-10390654 Caenorhabditis elegans
Exon27785   155   I: 10390703-10390857 Caenorhabditis elegans
Exon27790   186   I: 10391203-10391388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H11.4a.1 10384219 10391388 -1

1 Sequence

Length
3180

1 Sequence Ontology Term

Identifier Name Description
transcript