WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25D7.1 Sequence Name  F25D7.1
Length (nt)  738   Chromosome Location  I: 10399157-10399567
Chromosome . Primary Identifier  I Chromosome Location . Start  10399157
Chromosome Location . End  10399567
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D7.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09629 CUP-2 28.4 245 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00066066
WBRNAi00045490
WBRNAi00093255
WBRNAi00093254
WBRNAi00093402
WBRNAi00093477
WBRNAi00093485
WBRNAi00022585
WBRNAi00033263
WBRNAi00080955
WBRNAi00093501
WBRNAi00093493
WBRNAi00116810
WBRNAi00087148
WBRNAi00002122
WBRNAi00080954
WBRNAi00080956
WBRNAi00080957
WBRNAi00022333
WBRNAi00108400
WBRNAi00065521
WBRNAi00065522
WBRNAi00108403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25D7.1 10399157 10399567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000843 cup-2 F25D7.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25D7.1 10399157 10399567 -1
CDS:F25D7.1 10399794 10399970 -1
CDS:F25D7.1 10400028 10400177 -1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25D7.1.1 F25D7.1.1 905   I: 10398990-10400177