WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25D7.2.1 Sequence Name  F25D7.2.1
Length (nt)  1396   Chromosome Location  I: 10401064-10402762
Chromosome . Primary Identifier  I Chromosome Location . Start  10401064
Chromosome Location . End  10402762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009112 tag-353 F25D7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25D7.2 F25D7.2 1086   I: 10401071-10401241

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25D7.2.1 10401064 10402762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27798   178   I: 10401064-10401241 Caenorhabditis elegans
Exon27799   80   I: 10401293-10401372 Caenorhabditis elegans
Exon27800   120   I: 10401476-10401595 Caenorhabditis elegans
Exon27801   547   I: 10401699-10402245 Caenorhabditis elegans
Exon27802   471   I: 10402292-10402762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25D7.2.1 10401064 10402762 1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript