WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25D7.4.1 Sequence Name  F25D7.4.1
Length (nt)  2879   Chromosome Location  I: 10418234-10421858
Chromosome . Primary Identifier  I Chromosome Location . Start  10418234
Chromosome Location . End  10421858 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009113 maph-1.2 F25D7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25D7.4 F25D7.4 2625   I: 10418488-10418672

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25D7.4.1 10418234 10421858 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27820   439   I: 10418234-10418672 Caenorhabditis elegans
Exon27821   268   I: 10418719-10418986 Caenorhabditis elegans
Exon27822   468   I: 10419286-10419753 Caenorhabditis elegans
Exon27823   384   I: 10419870-10420253 Caenorhabditis elegans
Exon27824   177   I: 10420408-10420584 Caenorhabditis elegans
Exon27825   921   I: 10420671-10421591 Caenorhabditis elegans
Exon27826   222   I: 10421637-10421858 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25D7.4.1 10418234 10421858 -1

1 Sequence

Length
2879

1 Sequence Ontology Term

Identifier Name Description
transcript