WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6H.6a.1 Sequence Name  Y106G6H.6a.1
Length (nt)  1401   Chromosome Location  I: 10443667-10446043
Chromosome . Primary Identifier  I Chromosome Location . Start  10443667
Chromosome Location . End  10446043 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6H.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013719 Y106G6H.6 Y106G6H.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6H.6a Y106G6H.6a 1218   I: 10443850-10443987

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.6a.1 10443667 10446043 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27895   321   I: 10443667-10443987 Caenorhabditis elegans
Exon27903   256   I: 10444043-10444298 Caenorhabditis elegans
Exon27911   242   I: 10444757-10444998 Caenorhabditis elegans
Exon27919   198   I: 10445218-10445415 Caenorhabditis elegans
Exon27929   261   I: 10445528-10445788 Caenorhabditis elegans
Exon27935   123   I: 10445921-10446043 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.6a.1 10443667 10446043 -1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
transcript