WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6H.7.1 Sequence Name  Y106G6H.7.1
Length (nt)  2848   Chromosome Location  I: 10446657-10452075
Chromosome . Primary Identifier  I Chromosome Location . Start  10446657
Chromosome Location . End  10452075 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6H.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004753 sec-8 Y106G6H.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6H.7 Y106G6H.7 2682   I: 10446677-10446754

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.7.1 10446657 10452075 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27939   98   I: 10446657-10446754 Caenorhabditis elegans
Exon27940   139   I: 10446801-10446939 Caenorhabditis elegans
Exon27941   63   I: 10446984-10447046 Caenorhabditis elegans
Exon27942   139   I: 10447093-10447231 Caenorhabditis elegans
Exon27943   89   I: 10447280-10447368 Caenorhabditis elegans
Exon27944   143   I: 10447495-10447637 Caenorhabditis elegans
Exon27945   240   I: 10448152-10448391 Caenorhabditis elegans
Exon27946   93   I: 10448447-10448539 Caenorhabditis elegans
Exon27947   123   I: 10448961-10449083 Caenorhabditis elegans
Exon27948   138   I: 10449130-10449267 Caenorhabditis elegans
Exon27949   234   I: 10449318-10449551 Caenorhabditis elegans
Exon27950   153   I: 10449602-10449754 Caenorhabditis elegans
Exon27951   336   I: 10450024-10450359 Caenorhabditis elegans
Exon27952   99   I: 10450752-10450850 Caenorhabditis elegans
Exon27953   293   I: 10450902-10451194 Caenorhabditis elegans
Exon27954   186   I: 10451556-10451741 Caenorhabditis elegans
Exon27955   282   I: 10451794-10452075 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.7.1 10446657 10452075 1

1 Sequence

Length
2848

1 Sequence Ontology Term

Identifier Name Description
transcript