WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37D6.2a.2 Sequence Name  F37D6.2a.2
Length (nt)  1920   Chromosome Location  I: 10475525-10478118
Chromosome . Primary Identifier  I Chromosome Location . Start  10475525
Chromosome Location . End  10478118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37D6.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009508 row-1 F37D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37D6.2a F37D6.2a 1749   I: 10475673-10475754

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37D6.2a.2 10475525 10478118 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28005   230   I: 10475525-10475754 Caenorhabditis elegans
Exon28008   95   I: 10475803-10475897 Caenorhabditis elegans
Exon28012   108   I: 10475941-10476048 Caenorhabditis elegans
Exon28016   481   I: 10476249-10476729 Caenorhabditis elegans
Exon28021   140   I: 10476779-10476918 Caenorhabditis elegans
Exon28025   205   I: 10476966-10477170 Caenorhabditis elegans
Exon28029   122   I: 10477216-10477337 Caenorhabditis elegans
Exon28033   193   I: 10477386-10477578 Caenorhabditis elegans
Exon28038   243   I: 10477722-10477964 Caenorhabditis elegans
Exon28040   103   I: 10478016-10478118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37D6.2a.2 10475525 10478118 -1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
transcript