WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37D6.1b.1 Sequence Name  F37D6.1b.1
Length (nt)  3680   Chromosome Location  I: 10479302-10484964
Chromosome . Primary Identifier  I Chromosome Location . Start  10479302
Chromosome Location . End  10484964 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37D6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009507 mus-101 F37D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37D6.1b F37D6.1b 3561   I: 10479418-10479543

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37D6.1b.1 10479302 10484964 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28045   242   I: 10479302-10479543 Caenorhabditis elegans
Exon28047   192   I: 10479589-10479780 Caenorhabditis elegans
Exon28049   360   I: 10479912-10480271 Caenorhabditis elegans
Exon28051   153   I: 10480323-10480475 Caenorhabditis elegans
Exon28053   208   I: 10480610-10480817 Caenorhabditis elegans
Exon28055   545   I: 10481212-10481756 Caenorhabditis elegans
Exon28057   187   I: 10481806-10481992 Caenorhabditis elegans
Exon28059   163   I: 10482045-10482207 Caenorhabditis elegans
Exon28061   244   I: 10482667-10482910 Caenorhabditis elegans
Exon28063   151   I: 10482958-10483108 Caenorhabditis elegans
Exon28065   288   I: 10483159-10483446 Caenorhabditis elegans
Exon28067   233   I: 10483766-10483998 Caenorhabditis elegans
Exon28069   144   I: 10484052-10484195 Caenorhabditis elegans
Exon28071   244   I: 10484246-10484489 Caenorhabditis elegans
Exon28073   149   I: 10484550-10484698 Caenorhabditis elegans
Exon28075   132   I: 10484737-10484868 Caenorhabditis elegans
Exon28076   45   I: 10484920-10484964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37D6.1b.1 10479302 10484964 -1

1 Sequence

Length
3680

1 Sequence Ontology Term

Identifier Name Description
transcript