WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.3.1 Sequence Name  F25H2.3.1
Length (nt)  1100   Chromosome Location  I: 10547721-10549876
Chromosome . Primary Identifier  I Chromosome Location . Start  10547721
Chromosome Location . End  10549876 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009117 F25H2.3 F25H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.3 F25H2.3 951   I: 10547991-10548042

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.3.1 10547721 10549876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28176   86   I: 10547721-10547806 Caenorhabditis elegans
Exon28177   115   I: 10547928-10548042 Caenorhabditis elegans
Exon28178   97   I: 10548090-10548186 Caenorhabditis elegans
Exon28179   236   I: 10548344-10548579 Caenorhabditis elegans
Exon28180   53   I: 10548637-10548689 Caenorhabditis elegans
Exon28181   36   I: 10548752-10548787 Caenorhabditis elegans
Exon28182   93   I: 10548842-10548934 Caenorhabditis elegans
Exon28183   69   I: 10549347-10549415 Caenorhabditis elegans
Exon28184   69   I: 10549469-10549537 Caenorhabditis elegans
Exon28185   129   I: 10549581-10549709 Caenorhabditis elegans
Exon28186   117   I: 10549760-10549876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.3.1 10547721 10549876 1

1 Sequence

Length
1100

1 Sequence Ontology Term

Identifier Name Description
transcript