WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.6a.1 Sequence Name  F25H2.6a.1
Length (nt)  2118   Chromosome Location  I: 10554366-10557838
Chromosome . Primary Identifier  I Chromosome Location . Start  10554366
Chromosome Location . End  10557838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009120 cert-1 F25H2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.6a F25H2.6a 1722   I: 10554637-10554650

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.6a.1 10554366 10557838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28213   90   I: 10554366-10554455 Caenorhabditis elegans
Exon28215   113   I: 10554538-10554650 Caenorhabditis elegans
Exon28216   166   I: 10554725-10554890 Caenorhabditis elegans
Exon28219   120   I: 10554941-10555060 Caenorhabditis elegans
Exon28222   315   I: 10555429-10555743 Caenorhabditis elegans
Exon28225   189   I: 10555790-10555978 Caenorhabditis elegans
Exon28228   156   I: 10556361-10556516 Caenorhabditis elegans
Exon28231   98   I: 10556722-10556819 Caenorhabditis elegans
Exon28234   403   I: 10556868-10557270 Caenorhabditis elegans
Exon28237   133   I: 10557323-10557455 Caenorhabditis elegans
Exon28241   335   I: 10557504-10557838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.6a.1 10554366 10557838 1

1 Sequence

Length
2118

1 Sequence Ontology Term

Identifier Name Description
transcript