WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.6a.2 Sequence Name  F25H2.6a.2
Length (nt)  2200   Chromosome Location  I: 10554366-10557838
Chromosome . Primary Identifier  I Chromosome Location . Start  10554366
Chromosome Location . End  10557838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009120 cert-1 F25H2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.6a F25H2.6a 1722   I: 10554637-10554650

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.6a.2 10554366 10557838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28214   285   I: 10554366-10554650 Caenorhabditis elegans
Exon28217   166   I: 10554725-10554890 Caenorhabditis elegans
Exon28220   120   I: 10554941-10555060 Caenorhabditis elegans
Exon28223   315   I: 10555429-10555743 Caenorhabditis elegans
Exon28226   189   I: 10555790-10555978 Caenorhabditis elegans
Exon28229   156   I: 10556361-10556516 Caenorhabditis elegans
Exon28232   98   I: 10556722-10556819 Caenorhabditis elegans
Exon28235   403   I: 10556868-10557270 Caenorhabditis elegans
Exon28238   133   I: 10557323-10557455 Caenorhabditis elegans
Exon28242   335   I: 10557504-10557838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.6a.2 10554366 10557838 1

1 Sequence

Length
2200

1 Sequence Ontology Term

Identifier Name Description
transcript