WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.8.1 Sequence Name  F25H2.8.1
Length (nt)  1734   Chromosome Location  I: 10562970-10564903
Chromosome . Primary Identifier  I Chromosome Location . Start  10562970
Chromosome Location . End  10564903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006720 ubc-25 F25H2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.8 F25H2.8 1164   I: 10562990-10563067

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.8.1 10562970 10564903 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28224   98   I: 10562970-10563067 Caenorhabditis elegans
Exon28225   336   I: 10563111-10563446 Caenorhabditis elegans
Exon28226   492   I: 10563500-10563991 Caenorhabditis elegans
Exon28227   153   I: 10564044-10564196 Caenorhabditis elegans
Exon28228   655   I: 10564249-10564903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.8.1 10562970 10564903 1

1 Sequence

Length
1734

1 Sequence Ontology Term

Identifier Name Description
transcript