WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.7.1 Sequence Name  F25H2.7.1
Length (nt)  1368   Chromosome Location  I: 10558323-10560006
Chromosome . Primary Identifier  I Chromosome Location . Start  10558323
Chromosome Location . End  10560006 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009121 F25H2.7 F25H2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.7 F25H2.7 1107   I: 10558367-10558520

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.7.1 10558323 10560006 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28243   198   I: 10558323-10558520 Caenorhabditis elegans
Exon28244   173   I: 10558569-10558741 Caenorhabditis elegans
Exon28245   138   I: 10558790-10558927 Caenorhabditis elegans
Exon28246   162   I: 10558986-10559147 Caenorhabditis elegans
Exon28247   168   I: 10559202-10559369 Caenorhabditis elegans
Exon28248   86   I: 10559420-10559505 Caenorhabditis elegans
Exon28249   443   I: 10559564-10560006 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.7.1 10558323 10560006 1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
transcript