WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H2.12b.1 Sequence Name  F25H2.12b.1
Length (nt)  1450   Chromosome Location  I: 10570079-10571920
Chromosome . Primary Identifier  I Chromosome Location . Start  10570079
Chromosome Location . End  10571920 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H2.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009123 F25H2.12 F25H2.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H2.12b F25H2.12b 1323   I: 10570190-10570217

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.12b.1 10570079 10571920 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28242   139   I: 10570079-10570217 Caenorhabditis elegans
Exon28244   179   I: 10570264-10570442 Caenorhabditis elegans
Exon28247   130   I: 10570489-10570618 Caenorhabditis elegans
Exon28250   107   I: 10570665-10570771 Caenorhabditis elegans
Exon28253   342   I: 10570826-10571167 Caenorhabditis elegans
Exon28256   126   I: 10571215-10571340 Caenorhabditis elegans
Exon28259   96   I: 10571385-10571480 Caenorhabditis elegans
Exon28262   93   I: 10571535-10571627 Caenorhabditis elegans
Exon28265   238   I: 10571683-10571920 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H2.12b.1 10570079 10571920 1

1 Sequence

Length
1450

1 Sequence Ontology Term

Identifier Name Description
transcript