WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22A3.3b.2 Sequence Name  T22A3.3b.2
Length (nt)  1271   Chromosome Location  I: 10588931-10590460
Chromosome . Primary Identifier  I Chromosome Location . Start  10588931
Chromosome Location . End  10590460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22A3.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003083 lst-1 T22A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22A3.3b T22A3.3b 705   I: 10589117-10589479

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.3b.2 10588931 10590460 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28308   549   I: 10588931-10589479 Caenorhabditis elegans
Exon28313   254   I: 10589562-10589815 Caenorhabditis elegans
Exon28314   468   I: 10589993-10590460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.3b.2 10588931 10590460 1

1 Sequence

Length
1271

1 Sequence Ontology Term

Identifier Name Description
transcript