WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22A3.4a.1 Sequence Name  T22A3.4a.1
Length (nt)  1744   Chromosome Location  I: 10590703-10593968
Chromosome . Primary Identifier  I Chromosome Location . Start  10590703
Chromosome Location . End  10593968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22A3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044070 set-18 T22A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22A3.4a T22A3.4a 1506   I: 10590813-10590902

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.4a.1 10590703 10593968 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28317   200   I: 10590703-10590902 Caenorhabditis elegans
Exon28319   195   I: 10590949-10591143 Caenorhabditis elegans
Exon28321   146   I: 10591186-10591331 Caenorhabditis elegans
Exon28323   451   I: 10591861-10592311 Caenorhabditis elegans
Exon28325   141   I: 10592524-10592664 Caenorhabditis elegans
Exon28330   345   I: 10593303-10593647 Caenorhabditis elegans
Exon28334   266   I: 10593703-10593968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.4a.1 10590703 10593968 1

1 Sequence

Length
1744

1 Sequence Ontology Term

Identifier Name Description
transcript