WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22A3.5b.1 Sequence Name  T22A3.5b.1
Length (nt)  798   Chromosome Location  I: 10605039-10606348
Chromosome . Primary Identifier  I Chromosome Location . Start  10605039
Chromosome Location . End  10606348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22A3.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011908 pash-1 T22A3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22A3.5b T22A3.5b 798   I: 10605039-10605443

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.5b.1 10605039 10606348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28365   405   I: 10605039-10605443 Caenorhabditis elegans
Exon28366   393   I: 10605956-10606348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.5b.1 10605039 10606348 1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript