WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H8.2.1 Sequence Name  C43H8.2.1
Length (nt)  1039   Chromosome Location  I: 10623173-10624361
Chromosome . Primary Identifier  I Chromosome Location . Start  10623173
Chromosome Location . End  10624361 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016622 mafr-1 C43H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H8.2 C43H8.2 738   I: 10623178-10623260

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H8.2.1 10623173 10624361 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28381   88   I: 10623173-10623260 Caenorhabditis elegans
Exon28382   340   I: 10623311-10623650 Caenorhabditis elegans
Exon28383   122   I: 10623700-10623821 Caenorhabditis elegans
Exon28384   489   I: 10623873-10624361 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H8.2.1 10623173 10624361 1

1 Sequence

Length
1039

1 Sequence Ontology Term

Identifier Name Description
transcript