WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22A3.8.1 Sequence Name  T22A3.8.1
Length (nt)  9458   Chromosome Location  I: 10608466-10621435
Chromosome . Primary Identifier  I Chromosome Location . Start  10608466
Chromosome Location . End  10621435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22A3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002248 lam-3 T22A3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22A3.8 T22A3.8 9309   I: 10608493-10608625

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.8.1 10608466 10621435 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28394   160   I: 10608466-10608625 Caenorhabditis elegans
Exon28395   712   I: 10609324-10610035 Caenorhabditis elegans
Exon28396   91   I: 10610078-10610168 Caenorhabditis elegans
Exon28397   311   I: 10610468-10610778 Caenorhabditis elegans
Exon28398   2518   I: 10611209-10613726 Caenorhabditis elegans
Exon28399   222   I: 10613963-10614184 Caenorhabditis elegans
Exon28400   267   I: 10614229-10614495 Caenorhabditis elegans
Exon28401   1709   I: 10614544-10616252 Caenorhabditis elegans
Exon28402   2316   I: 10616479-10618794 Caenorhabditis elegans
Exon28403   356   I: 10619190-10619545 Caenorhabditis elegans
Exon28404   169   I: 10619596-10619764 Caenorhabditis elegans
Exon28405   385   I: 10620760-10621144 Caenorhabditis elegans
Exon28406   242   I: 10621194-10621435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22A3.8.1 10608466 10621435 1

1 Sequence

Length
9458

1 Sequence Ontology Term

Identifier Name Description
transcript