WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0511.13b Sequence Name  B0511.13b
Length (nt)  1098   Chromosome Location  I: 10634623-10634799
Chromosome . Primary Identifier  I Chromosome Location . Start  10634623
Chromosome Location . End  10634799
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0511.13b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46132 MPPE-1, isoform b 42.9 365 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039141
WBRNAi00082683
WBRNAi00117032
WBRNAi00082410
WBRNAi00111244

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0511.13b 10634623 10634799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015238 mppe-1 B0511.13 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0511.13b 10634623 10634799 -1
CDS:B0511.13b 10634851 10635133 -1
CDS:B0511.13b 10635191 10635409 -1
CDS:B0511.13b 10635539 10635835 -1
CDS:B0511.13b 10635885 10636006 -1

1 Sequence

Length
1098

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0511.13b.1 B0511.13b.1 1171   I: 10634572-10636028