WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0511.12a.1 Sequence Name  B0511.12a.1
Length (nt)  6961   Chromosome Location  I: 10654299-10666945
Chromosome . Primary Identifier  I Chromosome Location . Start  10654299
Chromosome Location . End  10666945 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0511.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015237 B0511.12 B0511.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0511.12a B0511.12a 6738   I: 10654454-10654717

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0511.12a.1 10654299 10666945 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28466   419   I: 10654299-10654717 Caenorhabditis elegans
Exon28468   111   I: 10655038-10655148 Caenorhabditis elegans
Exon28470   126   I: 10655195-10655320 Caenorhabditis elegans
Exon28472   811   I: 10655655-10656465 Caenorhabditis elegans
Exon28474   123   I: 10656515-10656637 Caenorhabditis elegans
Exon28476   318   I: 10656691-10657008 Caenorhabditis elegans
Exon28478   144   I: 10657449-10657592 Caenorhabditis elegans
Exon28480   296   I: 10657648-10657943 Caenorhabditis elegans
Exon28482   295   I: 10658424-10658718 Caenorhabditis elegans
Exon28484   256   I: 10658766-10659021 Caenorhabditis elegans
Exon28486   241   I: 10659073-10659313 Caenorhabditis elegans
Exon28488   204   I: 10659364-10659567 Caenorhabditis elegans
Exon28490   204   I: 10659616-10659819 Caenorhabditis elegans
Exon28492   364   I: 10659868-10660231 Caenorhabditis elegans
Exon28494   240   I: 10660284-10660523 Caenorhabditis elegans
Exon28496   457   I: 10660585-10661041 Caenorhabditis elegans
Exon28498   185   I: 10661086-10661270 Caenorhabditis elegans
Exon28500   400   I: 10661337-10661736 Caenorhabditis elegans
Exon28502   158   I: 10661785-10661942 Caenorhabditis elegans
Exon28505   386   I: 10662808-10663193 Caenorhabditis elegans
Exon28508   590   I: 10663898-10664487 Caenorhabditis elegans
Exon28509   48   I: 10665749-10665796 Caenorhabditis elegans
Exon28511   177   I: 10665844-10666020 Caenorhabditis elegans
Exon28513   103   I: 10666340-10666442 Caenorhabditis elegans
Exon28515   169   I: 10666489-10666657 Caenorhabditis elegans
Exon28518   136   I: 10666810-10666945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0511.12a.1 10654299 10666945 -1

1 Sequence

Length
6961

1 Sequence Ontology Term

Identifier Name Description
transcript