WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34B2.6.1 Sequence Name  C34B2.6.1
Length (nt)  3059   Chromosome Location  I: 10676922-10682374
Chromosome . Primary Identifier  I Chromosome Location . Start  10676922
Chromosome Location . End  10682374 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016391 lonp-1 C34B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34B2.6 C34B2.6 2916   I: 10677063-10677206

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34B2.6.1 10676922 10682374 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28549   285   I: 10676922-10677206 Caenorhabditis elegans
Exon28550   165   I: 10677254-10677418 Caenorhabditis elegans
Exon28551   243   I: 10677468-10677710 Caenorhabditis elegans
Exon28552   240   I: 10677757-10677996 Caenorhabditis elegans
Exon28553   259   I: 10678389-10678647 Caenorhabditis elegans
Exon28554   269   I: 10678699-10678967 Caenorhabditis elegans
Exon28555   253   I: 10679023-10679275 Caenorhabditis elegans
Exon28556   314   I: 10679886-10680199 Caenorhabditis elegans
Exon28557   163   I: 10680253-10680415 Caenorhabditis elegans
Exon28558   450   I: 10681076-10681525 Caenorhabditis elegans
Exon28559   92   I: 10681856-10681947 Caenorhabditis elegans
Exon28560   102   I: 10681997-10682098 Caenorhabditis elegans
Exon28561   224   I: 10682151-10682374 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34B2.6.1 10676922 10682374 -1

1 Sequence

Length
3059

1 Sequence Ontology Term

Identifier Name Description
transcript