WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34B2.10.1 Sequence Name  C34B2.10.1
Length (nt)  476   Chromosome Location  I: 10682472-10683048
Chromosome . Primary Identifier  I Chromosome Location . Start  10682472
Chromosome Location . End  10683048 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34B2.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016395 spcs-1 C34B2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34B2.10 C34B2.10 318   I: 10682622-10682687

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34B2.10.1 10682472 10683048 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28588   216   I: 10682472-10682687 Caenorhabditis elegans
Exon28589   156   I: 10682733-10682888 Caenorhabditis elegans
Exon28590   104   I: 10682945-10683048 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34B2.10.1 10682472 10683048 -1

1 Sequence

Length
476

1 Sequence Ontology Term

Identifier Name Description
transcript