WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0205.3.1 Sequence Name  B0205.3.1
Length (nt)  1290   Chromosome Location  I: 10730712-10732424
Chromosome . Primary Identifier  I Chromosome Location . Start  10730712
Chromosome Location . End  10732424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0205.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004466 rpn-10 B0205.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0205.3 B0205.3 1041   I: 10730928-10731299

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0205.3.1 10730712 10732424 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28659   588   I: 10730712-10731299 Caenorhabditis elegans
Exon28660   502   I: 10731353-10731854 Caenorhabditis elegans
Exon28661   141   I: 10732174-10732314 Caenorhabditis elegans
Exon28662   59   I: 10732366-10732424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0205.3.1 10730712 10732424 -1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript