WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0205.6.1 Sequence Name  B0205.6.1
Length (nt)  1431   Chromosome Location  I: 10736697-10739914
Chromosome . Primary Identifier  I Chromosome Location . Start  10736697
Chromosome Location . End  10739914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0205.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015021 nfs-1 B0205.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0205.6 B0205.6 1239   I: 10736749-10736817

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0205.6.1 10736697 10739914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28677   121   I: 10736697-10736817 Caenorhabditis elegans
Exon28678   138   I: 10737323-10737460 Caenorhabditis elegans
Exon28679   120   I: 10737505-10737624 Caenorhabditis elegans
Exon28680   99   I: 10737797-10737895 Caenorhabditis elegans
Exon28681   94   I: 10737941-10738034 Caenorhabditis elegans
Exon28682   135   I: 10738187-10738321 Caenorhabditis elegans
Exon28683   156   I: 10738372-10738527 Caenorhabditis elegans
Exon28684   141   I: 10738988-10739128 Caenorhabditis elegans
Exon28685   167   I: 10739438-10739604 Caenorhabditis elegans
Exon28686   260   I: 10739655-10739914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0205.6.1 10736697 10739914 1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript