WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37F4.5.1 Sequence Name  Y37F4.5.1
Length (nt)  1450   Chromosome Location  I: 10861194-10863559
Chromosome . Primary Identifier  I Chromosome Location . Start  10861194
Chromosome Location . End  10863559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37F4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021386 Y37F4.5 Y37F4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37F4.5 Y37F4.5 1326   I: 10861259-10861507

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37F4.5.1 10861194 10863559 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon28932   314   I: 10861194-10861507 Caenorhabditis elegans
Exon28933   164   I: 10861605-10861768 Caenorhabditis elegans
Exon28935   167   I: 10861975-10862141 Caenorhabditis elegans
Exon28937   121   I: 10862192-10862312 Caenorhabditis elegans
Exon28939   303   I: 10862386-10862688 Caenorhabditis elegans
Exon28941   41   I: 10862735-10862775 Caenorhabditis elegans
Exon28943   183   I: 10862844-10863026 Caenorhabditis elegans
Exon28945   43   I: 10863309-10863351 Caenorhabditis elegans
Exon28947   64   I: 10863399-10863462 Caenorhabditis elegans
Exon28949   50   I: 10863510-10863559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37F4.5.1 10861194 10863559 -1

1 Sequence

Length
1450

1 Sequence Ontology Term

Identifier Name Description
transcript