WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27C10.6.1 Sequence Name  T27C10.6.1
Length (nt)  7389   Chromosome Location  I: 10879769-10894237
Chromosome . Primary Identifier  I Chromosome Location . Start  10879769
Chromosome Location . End  10894237 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27C10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003068 lrk-1 T27C10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C10.6 T27C10.6 7182   I: 10879964-10880123

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27C10.6.1 10879769 10894237 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29005   355   I: 10879769-10880123 Caenorhabditis elegans
Exon29006   176   I: 10880317-10880492 Caenorhabditis elegans
Exon29007   459   I: 10880539-10880997 Caenorhabditis elegans
Exon29009   90   I: 10881651-10881740 Caenorhabditis elegans
Exon29010   1432   I: 10881791-10883222 Caenorhabditis elegans
Exon29011   177   I: 10883277-10883453 Caenorhabditis elegans
Exon29015   233   I: 10884147-10884379 Caenorhabditis elegans
Exon29016   772   I: 10884625-10885396 Caenorhabditis elegans
Exon29017   1352   I: 10885444-10886795 Caenorhabditis elegans
Exon29018   350   I: 10886842-10887191 Caenorhabditis elegans
Exon29019   845   I: 10887240-10888084 Caenorhabditis elegans
Exon29020   119   I: 10888130-10888248 Caenorhabditis elegans
Exon29021   169   I: 10888619-10888787 Caenorhabditis elegans
Exon29022   92   I: 10888839-10888930 Caenorhabditis elegans
Exon29035   145   I: 10892199-10892343 Caenorhabditis elegans
Exon29036   63   I: 10892619-10892681 Caenorhabditis elegans
Exon29037   106   I: 10892732-10892837 Caenorhabditis elegans
Exon29038   198   I: 10892947-10893144 Caenorhabditis elegans
Exon29039   157   I: 10893935-10894091 Caenorhabditis elegans
Exon29040   99   I: 10894139-10894237 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27C10.6.1 10879769 10894237 -1

1 Sequence

Length
7389

1 Sequence Ontology Term

Identifier Name Description
transcript