WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27C10.2.1 Sequence Name  T27C10.2.1
Length (nt)  1183   Chromosome Location  I: 10899089-10902220
Chromosome . Primary Identifier  I Chromosome Location . Start  10899089
Chromosome Location . End  10902220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27C10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020857 srt-62 T27C10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C10.2 T27C10.2 966   I: 10899110-10899235

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27C10.2.1 10899089 10902220 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29015   147   I: 10899089-10899235 Caenorhabditis elegans
Exon29016   150   I: 10899340-10899489 Caenorhabditis elegans
Exon29017   132   I: 10899537-10899668 Caenorhabditis elegans
Exon29018   336   I: 10900920-10901255 Caenorhabditis elegans
Exon29019   98   I: 10901313-10901410 Caenorhabditis elegans
Exon29020   320   I: 10901901-10902220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27C10.2.1 10899089 10902220 1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript