WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49D11.2.1 Sequence Name  F49D11.2.1
Length (nt)  1404   Chromosome Location  I: 10921408-10923587
Chromosome . Primary Identifier  I Chromosome Location . Start  10921408
Chromosome Location . End  10923587 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49D11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018626 F49D11.2 F49D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49D11.2 F49D11.2 1293   I: 10921416-10921582

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.2.1 10921408 10923587 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29054   175   I: 10921408-10921582 Caenorhabditis elegans
Exon29055   137   I: 10921731-10921867 Caenorhabditis elegans
Exon29056   127   I: 10921910-10922036 Caenorhabditis elegans
Exon29057   63   I: 10922088-10922150 Caenorhabditis elegans
Exon29058   322   I: 10922203-10922524 Caenorhabditis elegans
Exon29059   308   I: 10922953-10923260 Caenorhabditis elegans
Exon29060   272   I: 10923316-10923587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.2.1 10921408 10923587 1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
transcript