WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49D11.8.1 Sequence Name  F49D11.8.1
Length (nt)  569   Chromosome Location  I: 10924240-10925750
Chromosome . Primary Identifier  I Chromosome Location . Start  10924240
Chromosome Location . End  10925750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49D11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49D11.8 F49D11.8 465   I: 10924340-10924402

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.8.1 10924240 10925750 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29063   163   I: 10924240-10924402 Caenorhabditis elegans
Exon29064   78   I: 10924455-10924532 Caenorhabditis elegans
Exon29065   127   I: 10924592-10924718 Caenorhabditis elegans
Exon29066   83   I: 10925082-10925164 Caenorhabditis elegans
Exon29067   118   I: 10925633-10925750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.8.1 10924240 10925750 -1

1 Sequence

Length
569

1 Sequence Ontology Term

Identifier Name Description
transcript