WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49D11.10.2 Sequence Name  F49D11.10.2
Length (nt)  2302   Chromosome Location  I: 10926945-10933705
Chromosome . Primary Identifier  I Chromosome Location . Start  10926945
Chromosome Location . End  10933705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49D11.10.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045433 F49D11.10 F49D11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49D11.10 F49D11.10 2184   I: 10927089-10927355

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.10.2 10926945 10933705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29069   56   I: 10926945-10927000 Caenorhabditis elegans
Exon29070   327   I: 10927029-10927355 Caenorhabditis elegans
Exon29076   327   I: 10928071-10928397 Caenorhabditis elegans
Exon29078   192   I: 10928775-10928966 Caenorhabditis elegans
Exon29080   358   I: 10929084-10929441 Caenorhabditis elegans
Exon29082   103   I: 10929971-10930073 Caenorhabditis elegans
Exon29084   321   I: 10931455-10931775 Caenorhabditis elegans
Exon29086   311   I: 10932526-10932836 Caenorhabditis elegans
Exon29088   228   I: 10932882-10933109 Caenorhabditis elegans
Exon29089   79   I: 10933627-10933705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49D11.10.2 10926945 10933705 -1

1 Sequence

Length
2302

1 Sequence Ontology Term

Identifier Name Description
transcript