WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y52B11A.3c Sequence Name  Y52B11A.3c
Length (nt)  1623   Chromosome Location  I: 10970498-10970638
Chromosome . Primary Identifier  I Chromosome Location . Start  10970498
Chromosome Location . End  10970638
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52B11A.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54275 Y52B11A.3, isoform c 60.8 540 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057221
WBRNAi00037386

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y52B11A.3c 10970498 10970638 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013123 Y52B11A.3 Y52B11A.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y52B11A.3c 10970498 10970638 1
CDS:Y52B11A.3c 10972159 10972251 1
CDS:Y52B11A.3c 10973150 10973327 1
CDS:Y52B11A.3c 10974608 10974819 1
CDS:Y52B11A.3c 10976212 10976584 1
CDS:Y52B11A.3c 10977650 10978056 1
CDS:Y52B11A.3c 10978790 10978953 1
CDS:Y52B11A.3c 10979549 10979603 1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y52B11A.3c.1 Y52B11A.3c.1 1782   I: 10970487-10979751