WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52B11A.4.1 Sequence Name  Y52B11A.4.1
Length (nt)  1823   Chromosome Location  I: 10979589-11004283
Chromosome . Primary Identifier  I Chromosome Location . Start  10979589
Chromosome Location . End  11004283 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52B11A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013124 Y52B11A.4 Y52B11A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52B11A.4 Y52B11A.4 1404   I: 10980008-10980096

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y52B11A.4.1 10979589 11004283 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29178   508   I: 10979589-10980096 Caenorhabditis elegans
Exon29180   237   I: 10980304-10980540 Caenorhabditis elegans
Exon29181   94   I: 10981007-10981100 Caenorhabditis elegans
Exon29182   173   I: 10981276-10981448 Caenorhabditis elegans
Exon29183   94   I: 10981491-10981584 Caenorhabditis elegans
Exon29184   247   I: 10982305-10982551 Caenorhabditis elegans
Exon29185   102   I: 10983342-10983443 Caenorhabditis elegans
Exon29186   86   I: 10985001-10985086 Caenorhabditis elegans
Exon29187   124   I: 10990504-10990627 Caenorhabditis elegans
Exon29189   158   I: 11004126-11004283 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y52B11A.4.1 10979589 11004283 -1

1 Sequence

Length
1823

1 Sequence Ontology Term

Identifier Name Description
transcript