WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52B11A.10.1 Sequence Name  Y52B11A.10.1
Length (nt)  2565   Chromosome Location  I: 11039056-11052497
Chromosome . Primary Identifier  I Chromosome Location . Start  11039056
Chromosome Location . End  11052497 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52B11A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013129 Y52B11A.10 Y52B11A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52B11A.10 Y52B11A.10 2460   I: 11039062-11039169

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y52B11A.10.1 11039056 11052497 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29224   114   I: 11039056-11039169 Caenorhabditis elegans
Exon29225   183   I: 11039211-11039393 Caenorhabditis elegans
Exon29226   126   I: 11039437-11039562 Caenorhabditis elegans
Exon29227   157   I: 11040609-11040765 Caenorhabditis elegans
Exon29228   182   I: 11041463-11041644 Caenorhabditis elegans
Exon29229   337   I: 11043197-11043533 Caenorhabditis elegans
Exon29230   129   I: 11045323-11045451 Caenorhabditis elegans
Exon29231   122   I: 11046103-11046224 Caenorhabditis elegans
Exon29232   94   I: 11046275-11046368 Caenorhabditis elegans
Exon29233   213   I: 11047425-11047637 Caenorhabditis elegans
Exon29234   85   I: 11048523-11048607 Caenorhabditis elegans
Exon29235   173   I: 11049202-11049374 Caenorhabditis elegans
Exon29236   176   I: 11049951-11050126 Caenorhabditis elegans
Exon29237   132   I: 11051166-11051297 Caenorhabditis elegans
Exon29238   153   I: 11051777-11051929 Caenorhabditis elegans
Exon29239   189   I: 11052309-11052497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y52B11A.10.1 11039056 11052497 1

1 Sequence

Length
2565

1 Sequence Ontology Term

Identifier Name Description
transcript