WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02B9.1d.1 Sequence Name  W02B9.1d.1
Length (nt)  3195   Chromosome Location  I: 11076372-11087832
Chromosome . Primary Identifier  I Chromosome Location . Start  11076372
Chromosome Location . End  11087832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02B9.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02B9.1d W02B9.1d 3195   I: 11076372-11076623

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1d.1 11076372 11087832 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29257   252   I: 11076372-11076623 Caenorhabditis elegans
Exon29261   483   I: 11077478-11077960 Caenorhabditis elegans
Exon29266   402   I: 11079052-11079453 Caenorhabditis elegans
Exon29271   682   I: 11080117-11080798 Caenorhabditis elegans
Exon29276   521   I: 11081585-11082105 Caenorhabditis elegans
Exon29282   477   I: 11083589-11084065 Caenorhabditis elegans
Exon29287   238   I: 11086726-11086963 Caenorhabditis elegans
Exon29288   140   I: 11087693-11087832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1d.1 11076372 11087832 -1

1 Sequence

Length
3195

1 Sequence Ontology Term

Identifier Name Description
transcript