WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02B9.1a.2 Sequence Name  W02B9.1a.2
Length (nt)  4653   Chromosome Location  I: 11075755-11094526
Chromosome . Primary Identifier  I Chromosome Location . Start  11075755
Chromosome Location . End  11094526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02B9.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02B9.1a W02B9.1a 3810   I: 11076372-11076623

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1a.2 11075755 11094526 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29279   869   I: 11075755-11076623 Caenorhabditis elegans
Exon29285   483   I: 11077478-11077960 Caenorhabditis elegans
Exon29290   402   I: 11079052-11079453 Caenorhabditis elegans
Exon29295   682   I: 11080117-11080798 Caenorhabditis elegans
Exon29300   521   I: 11081585-11082105 Caenorhabditis elegans
Exon29306   477   I: 11083589-11084065 Caenorhabditis elegans
Exon29311   238   I: 11086726-11086963 Caenorhabditis elegans
Exon29316   160   I: 11087693-11087852 Caenorhabditis elegans
Exon29320   134   I: 11088412-11088545 Caenorhabditis elegans
Exon29322   534   I: 11093799-11094332 Caenorhabditis elegans
Exon29325   153   I: 11094374-11094526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1a.2 11075755 11094526 -1

1 Sequence

Length
4653

1 Sequence Ontology Term

Identifier Name Description
transcript