WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02B9.1b.1 Sequence Name  W02B9.1b.1
Length (nt)  9485   Chromosome Location  I: 11075758-11134667
Chromosome . Primary Identifier  I Chromosome Location . Start  11075758
Chromosome Location . End  11134667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02B9.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02B9.1b W02B9.1b 8763   I: 11076372-11076623

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1b.1 11075758 11134667 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29280   866   I: 11075758-11076623 Caenorhabditis elegans
Exon29286   483   I: 11077478-11077960 Caenorhabditis elegans
Exon29291   402   I: 11079052-11079453 Caenorhabditis elegans
Exon29296   682   I: 11080117-11080798 Caenorhabditis elegans
Exon29301   521   I: 11081585-11082105 Caenorhabditis elegans
Exon29307   477   I: 11083589-11084065 Caenorhabditis elegans
Exon29312   238   I: 11086726-11086963 Caenorhabditis elegans
Exon29317   160   I: 11087693-11087852 Caenorhabditis elegans
Exon29321   134   I: 11088412-11088545 Caenorhabditis elegans
Exon29324   230   I: 11094103-11094332 Caenorhabditis elegans
Exon29329   195   I: 11112643-11112837 Caenorhabditis elegans
Exon29330   147   I: 11113753-11113899 Caenorhabditis elegans
Exon29331   158   I: 11113945-11114102 Caenorhabditis elegans
Exon29332   85   I: 11114151-11114235 Caenorhabditis elegans
Exon29333   506   I: 11114682-11115187 Caenorhabditis elegans
Exon29334   144   I: 11115258-11115401 Caenorhabditis elegans
Exon29335   254   I: 11115449-11115702 Caenorhabditis elegans
Exon29336   140   I: 11117118-11117257 Caenorhabditis elegans
Exon29337   705   I: 11117309-11118013 Caenorhabditis elegans
Exon29338   251   I: 11118873-11119123 Caenorhabditis elegans
Exon29339   286   I: 11119173-11119458 Caenorhabditis elegans
Exon29340   323   I: 11120001-11120323 Caenorhabditis elegans
Exon29342   347   I: 11121225-11121571 Caenorhabditis elegans
Exon29343   241   I: 11122447-11122687 Caenorhabditis elegans
Exon29344   192   I: 11122886-11123077 Caenorhabditis elegans
Exon29347   160   I: 11127806-11127965 Caenorhabditis elegans
Exon29348   295   I: 11128427-11128721 Caenorhabditis elegans
Exon29349   134   I: 11128818-11128951 Caenorhabditis elegans
Exon29350   417   I: 11129322-11129738 Caenorhabditis elegans
Exon29351   150   I: 11130182-11130331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02B9.1b.1 11075758 11134667 -1

1 Sequence

Length
9485

1 Sequence Ontology Term

Identifier Name Description
transcript