WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D9.1.1 Sequence Name  F28D9.1.1
Length (nt)  2024   Chromosome Location  I: 11177848-11182063
Chromosome . Primary Identifier  I Chromosome Location . Start  11177848
Chromosome Location . End  11182063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004706 rsr-1 F28D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D9.1 F28D9.1 1806   I: 11178065-11178136

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28D9.1.1 11177848 11182063 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29380   289   I: 11177848-11178136 Caenorhabditis elegans
Exon29381   1476   I: 11179093-11180568 Caenorhabditis elegans
Exon29382   147   I: 11181652-11181798 Caenorhabditis elegans
Exon29383   112   I: 11181952-11182063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28D9.1.1 11177848 11182063 -1

1 Sequence

Length
2024

1 Sequence Ontology Term

Identifier Name Description
transcript