WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D1.2.1 Sequence Name  F36D1.2.1
Length (nt)  1250   Chromosome Location  I: 11282426-11286561
Chromosome . Primary Identifier  I Chromosome Location . Start  11282426
Chromosome Location . End  11286561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009462 sre-22 F36D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D1.2 F36D1.2 1080   I: 11282473-11282610

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D1.2.1 11282426 11286561 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29551   185   I: 11282426-11282610 Caenorhabditis elegans
Exon29552   109   I: 11282668-11282776 Caenorhabditis elegans
Exon29553   137   I: 11283475-11283611 Caenorhabditis elegans
Exon29554   123   I: 11283670-11283792 Caenorhabditis elegans
Exon29555   157   I: 11283984-11284140 Caenorhabditis elegans
Exon29558   169   I: 11284838-11285006 Caenorhabditis elegans
Exon29559   122   I: 11285052-11285173 Caenorhabditis elegans
Exon29560   139   I: 11286166-11286304 Caenorhabditis elegans
Exon29561   109   I: 11286453-11286561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D1.2.1 11282426 11286561 -1

1 Sequence

Length
1250

1 Sequence Ontology Term

Identifier Name Description
transcript