WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:H25P06.4.1 Sequence Name  H25P06.4.1
Length (nt)  927   Chromosome Location  I: 11308121-11311053
Chromosome . Primary Identifier  I Chromosome Location . Start  11308121
Chromosome Location . End  11311053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25P06.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010417 clpr-3 H25P06.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25P06.4 H25P06.4 927   I: 11308121-11308250

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.4.1 11308121 11311053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29599   130   I: 11308121-11308250 Caenorhabditis elegans
Exon29600   181   I: 11308300-11308480 Caenorhabditis elegans
Exon29601   221   I: 11308524-11308744 Caenorhabditis elegans
Exon29602   76   I: 11308794-11308869 Caenorhabditis elegans
Exon29603   200   I: 11309453-11309652 Caenorhabditis elegans
Exon29604   119   I: 11310935-11311053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.4.1 11308121 11311053 -1

1 Sequence

Length
927

1 Sequence Ontology Term

Identifier Name Description
transcript