WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H25P06.1.1 Sequence Name  H25P06.1.1
Length (nt)  1974   Chromosome Location  I: 11311524-11323110
Chromosome . Primary Identifier  I Chromosome Location . Start  11311524
Chromosome Location . End  11323110 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25P06.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010416 hxk-2 H25P06.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25P06.1 H25P06.1 1659   I: 11311821-11311978

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.1.1 11311524 11323110 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29605   455   I: 11311524-11311978 Caenorhabditis elegans
Exon29606   106   I: 11312035-11312140 Caenorhabditis elegans
Exon29607   137   I: 11313370-11313506 Caenorhabditis elegans
Exon29608   140   I: 11315211-11315350 Caenorhabditis elegans
Exon29609   156   I: 11315695-11315850 Caenorhabditis elegans
Exon29610   113   I: 11317036-11317148 Caenorhabditis elegans
Exon29611   119   I: 11317328-11317446 Caenorhabditis elegans
Exon29612   155   I: 11319742-11319896 Caenorhabditis elegans
Exon29613   134   I: 11319966-11320099 Caenorhabditis elegans
Exon29614   143   I: 11321331-11321473 Caenorhabditis elegans
Exon29615   160   I: 11322212-11322371 Caenorhabditis elegans
Exon29616   103   I: 11322881-11322983 Caenorhabditis elegans
Exon29617   53   I: 11323058-11323110 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.1.1 11311524 11323110 -1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
transcript