WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53H1B.6.1 Sequence Name  Y53H1B.6.1
Length (nt)  927   Chromosome Location  I: 11302286-11305218
Chromosome . Primary Identifier  I Chromosome Location . Start  11302286
Chromosome Location . End  11305218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53H1B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013184 clpr-4 Y53H1B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53H1B.6 Y53H1B.6 927   I: 11302286-11302404

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1B.6.1 11302286 11305218 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29616   119   I: 11302286-11302404 Caenorhabditis elegans
Exon29617   200   I: 11303687-11303886 Caenorhabditis elegans
Exon29618   76   I: 11304470-11304545 Caenorhabditis elegans
Exon29619   221   I: 11304595-11304815 Caenorhabditis elegans
Exon29620   181   I: 11304859-11305039 Caenorhabditis elegans
Exon29621   130   I: 11305089-11305218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53H1B.6.1 11302286 11305218 1

1 Sequence

Length
927

1 Sequence Ontology Term

Identifier Name Description
transcript