WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H25P06.2b.1 Sequence Name  H25P06.2b.1
Length (nt)  1604   Chromosome Location  I: 11323527-11333154
Chromosome . Primary Identifier  I Chromosome Location . Start  11323527
Chromosome Location . End  11333154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25P06.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000410 cdk-9 H25P06.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25P06.2b H25P06.2b 1437   I: 11323532-11323581

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.2b.1 11323527 11333154 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29645   55   I: 11323527-11323581 Caenorhabditis elegans
Exon29647   48   I: 11324872-11324919 Caenorhabditis elegans
Exon29649   192   I: 11325747-11325938 Caenorhabditis elegans
Exon29653   173   I: 11326693-11326865 Caenorhabditis elegans
Exon29655   276   I: 11327452-11327727 Caenorhabditis elegans
Exon29657   224   I: 11328650-11328873 Caenorhabditis elegans
Exon29660   141   I: 11330688-11330828 Caenorhabditis elegans
Exon29662   42   I: 11330913-11330954 Caenorhabditis elegans
Exon29663   147   I: 11331503-11331649 Caenorhabditis elegans
Exon29665   306   I: 11332849-11333154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H25P06.2b.1 11323527 11333154 1

1 Sequence

Length
1604

1 Sequence Ontology Term

Identifier Name Description
transcript