WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56G4.5.1 Sequence Name  F56G4.5.1
Length (nt)  1919   Chromosome Location  I: 11380231-11388751
Chromosome . Primary Identifier  I Chromosome Location . Start  11380231
Chromosome Location . End  11388751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56G4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010160 png-1 F56G4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56G4.5 F56G4.5 1821   I: 11380238-11380288

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56G4.5.1 11380231 11388751 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29691   58   I: 11380231-11380288 Caenorhabditis elegans
Exon29692   145   I: 11380511-11380655 Caenorhabditis elegans
Exon29694   321   I: 11381245-11381565 Caenorhabditis elegans
Exon29696   223   I: 11382927-11383149 Caenorhabditis elegans
Exon29698   280   I: 11384085-11384364 Caenorhabditis elegans
Exon29699   211   I: 11386390-11386600 Caenorhabditis elegans
Exon29700   266   I: 11387452-11387717 Caenorhabditis elegans
Exon29701   120   I: 11388216-11388335 Caenorhabditis elegans
Exon29702   78   I: 11388411-11388488 Caenorhabditis elegans
Exon29703   217   I: 11388535-11388751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56G4.5.1 11380231 11388751 1

1 Sequence

Length
1919

1 Sequence Ontology Term

Identifier Name Description
transcript