WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C7.3.1 Sequence Name  C27C7.3.1
Length (nt)  1101   Chromosome Location  I: 11429014-11432156
Chromosome . Primary Identifier  I Chromosome Location . Start  11429014
Chromosome Location . End  11432156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003664 nhr-74 C27C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C7.3 C27C7.3 951   I: 11429072-11429096

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.3.1 11429014 11432156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29788   83   I: 11429014-11429096 Caenorhabditis elegans
Exon29791   144   I: 11429750-11429893 Caenorhabditis elegans
Exon29792   66   I: 11429954-11430019 Caenorhabditis elegans
Exon29793   60   I: 11430069-11430128 Caenorhabditis elegans
Exon29795   101   I: 11430173-11430273 Caenorhabditis elegans
Exon29796   224   I: 11431361-11431584 Caenorhabditis elegans
Exon29797   202   I: 11431633-11431834 Caenorhabditis elegans
Exon29798   75   I: 11431886-11431960 Caenorhabditis elegans
Exon29799   146   I: 11432011-11432156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.3.1 11429014 11432156 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
transcript