WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C7.5a.1 Sequence Name  C27C7.5a.1
Length (nt)  879   Chromosome Location  I: 11423993-11426054
Chromosome . Primary Identifier  I Chromosome Location . Start  11423993
Chromosome Location . End  11426054 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007768 C27C7.5 C27C7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C7.5a C27C7.5a 840   I: 11424032-11424274

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.5a.1 11423993 11426054 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29803   282   I: 11423993-11424274 Caenorhabditis elegans
Exon29805   188   I: 11424493-11424680 Caenorhabditis elegans
Exon29807   145   I: 11424727-11424871 Caenorhabditis elegans
Exon29810   225   I: 11425746-11425970 Caenorhabditis elegans
Exon29811   39   I: 11426016-11426054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.5a.1 11423993 11426054 -1

1 Sequence

Length
879

1 Sequence Ontology Term

Identifier Name Description
transcript